Aim of this study was the assessment of the conservation status of vascular plants in East African rain forests with the background of establishing an ex-situ culture of local endangered plants at the Botanic Garden of the Maseno University (Kenya). For a sustainable implementation it was first necessary to learn more about the general species inventory, especially concerning species composition and abundance under human impact, and to assess the conservation priority of each plant species. Representative for East African rain forests, Kakamega Forest (Kenya) and Budongo Forest (Uganda) were selected to serve as model forests. Beside the general floristic investigations including all vascular plants, a special focus was laid on vascular epiphytes and their vulnerability to forest disturbance. To assess the conservation priority of the plants, a rating system was developed based on seven threat criteria. By carrying out first plant collections, the exsitu culture in Maseno Botanic Garden was already initiated.