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Vertebrate biodiversity is rapidly decreasing worldwide with amphibians being the most endangered vertebrate group. In the EU, 21 of 89 amphibian species are recognized as being endangered. The intensively used European agricultural landscape is one of the major causes for these declines. As agriculture represents an essential habitat for amphibians, exposure to pesticides can have adverse effects on amphibian populations. Currently, the European risk assessment of pesticides for vertebrates requires specific approaches for fish regarding aquatic vertebrate toxicity and birds as well as mammals for terrestrial vertebrate toxicity but does not address the unique characteristics of amphibians. Therefore, the overall goal of this thesis was to investigate the ecotoxicological effects of pesticides on Central European anuran amphibians. For this, effects on aquatic and terrestrial amphibian life stages as well as on reproduction were investigated. Then, in anticipation of a risk assessment of pesticides for amphibians, this thesis discussed potential regulatory risk assessment approaches.
For the investigated pesticides and amphibian species, it was observed that the acute aquatic toxicity of pesticides can be addressed using the existing aquatic risk assessment approach based on fish toxicity data. However, lethal as well as sublethal effects were observed in terrestrial juveniles after dermal exposure to environmentally realistic pesticide concentrations, which cannot be covered using an existing risk assessment approach. Therefore, pesticides should also be evaluated for potential terrestrial toxicity using risk assessment tools before approval. Additionally, effects of co-formulants and adjuvants of pesticides need specific consideration in a future risk assessment as they can increase toxicity of pesticides to aquatic and terrestrial amphibian stages. The chronic duration of combined aquatic and terrestrial exposure was shown to affect amphibian reproduction. Currently, such effects cannot be captured by the existing risk assessment as data involving field scenarios analysing effects of multiple pesticides on amphibian reproduction are too rare to allow comparison to data of other terrestrial vertebrates such as birds and mammals. In the light of these findings, future research should not only address acute and lethal effects, but also chronic and sublethal effects on a population level. As pesticide exposure can adversely affect amphibian populations, their application should be considered even more carefully to avoid further amphibian declines. Overall, this thesis emphasizes the urgent need for a protective pesticide risk assessment for amphibians to preserve and promote stable amphibian populations in agricultural landscapes.
The role of alternative resources for pollinators and aphid predators in agricultural landscapes
(2021)
The world wide decline of insects is often associated with loss of natural and semi-natural habitat caused by intensified land-use. Many insects provide important ecosystem services to agriculture, such as pest control or pollination. To efficiently promote insects on remaining semi-natural habitat we need precise knowledge of their requirements to non-crop habitat. This thesis focuses on identifying
the most important semi-natural habitats (forest edges, grasslands, and semi-open habitats) for pollinators and natural enemies of crop pests with respect to their food resource requirements. Special
attention is given to floral resources and their spatio-temporal distribution in agricultural landscapes.
Floral resource maps might get closer at characterizing landscapes the way they are experienced by insects compared to classical habitat maps. Performance of the two map types was compared on the prediction of wild bees and natural enemies that consume nectar and pollen, identifying habitats of special importance in the process. In wild bees, influences of spatio-temporal floral resource availability were analysed as well as habitat preferences of specific groups of bees. Understanding dietary needs of natural enemies of crop pests requires additional knowledge on prey use. To this end, ladybird gut contents have been analysed by means of high-throughput sequencing for insight into aphid prey-use.
Results showed, that wild bees were predicted better by floral resource maps compared to classical habitat maps. Forest edge area, as well as floral resources in forest edges had positive effects on abundance and diversity of rare bees and important crop pollinators. Similar patterns were retained for grassland diversity. Especially early floral resources seemed to have positive effects on wild bees. Crops and fruit trees produced a resource pulse in April that exceeded floral resource availability in May and June by tenfold. Most floral resources in forest edges appeared early in the season, with the highest floral density per area. Grasslands provided the lowest amount of floral resources but highest diversity, which was evenly distributed over the season.
Despite natural enemies need for floral resources, classical habitat maps performed better at predicting natural enemies of crop pests compared to floral resource maps. Classical habitat maps revealed a positive effect of forest edge habitat on the abundance of pest enemies, which translated into improved aphid control. Results from gut content analysis reveal high portions of pest aphid species and nettle aphids as well as a broader insight into prey spectra retained from ladybirds collected from sticky traps compared to individuals collected by hand. The aphid specific primer designed for this purpose will be helpful for identifying aphid consumption by ladybirds in future studies.
Findings of this thesis show the potential of floral resource maps for understanding interactions of wild bees and the landscape but also indicate that natural enemies are limited by other resources. I would like to highlight the positive effects of forest edges for different groups of bees as well as natural enemies and their performance on pest control.
Wild bees are essential for the pollination of wild and cultivated plants. However, within the
last decades, the increasing intensification of modern agriculture has led to both a reduction and fragmentation as well as a degradation of the habitats wild bees need. The resulting loss of pollinators and their pollination poses an immense challenge to global food production. To support wild bees, the availability of flowering resources is essential. However, the flowering period of each resource is temporally limited and has different effects on pollinators and their pollination, depending on the time of their flowering.
Therefore, to efficiently promote and manage wild bee pollinators in agricultural landscapes, we identified species-specific key floral resources of three selected wild bee species and their spatial and temporal availability (CHAPTERS 2, 3 & 4). We examined, which habitat types predominantly provide these resources (CHAPTERS 3 & 4). We also investigated whether floral resource maps based on the use of these key resources and their spatial and temporal availability explain the abundance and development of the selected wild bees (CHAPTERS 3 & 4) and pollination (CHAPTER 5) better than habitat maps, that only indirectly account for the availability of floral resources.
For each of the species studied, we were able to identify different key pollen sources, predominantly woody plants in the early season (April/May) and increasingly herbaceous plants in the later season (June/July; CHAPTERS 2, 3 & 4). The open woody semi-natural habitats of our agricultural landscapes provided about 75% of the floral resources for the buff-tailed bumblebees, 60% for the red mason bees, and 55% for the horned mason bees studied, although they accounted for only 3% of the area (CHAPTERS 3 & 4). In addition, fruit orchards provided about 35% of the floral resources for the horned mason bees on 4% of the landscape area (CHAPTER 3). We showed that both mason bee species benefited from the resource availability in the surrounding landscapes (CHAPTER 3). Yet this was not the case for the bumblebees (CHAPTER 4). Instead, the weight gain of their colonies, the number of developed queen cells and their colony survival were higher with increasing proximity to forests. The proximity to forests also had a positive effect on the mason bees studied (CHAPTER 3). In addition, the red mason bees benefited from herbaceous semi-natural habitats. The proportion of built-up areas had a negative effect on the horned mason bees, and the proportion of arable land on the red mason bees. The habitat maps explained horned mason bee abundances equally well as the floral resource maps, but red mason bee abundances were distinctly better explained by key floral resources. The pollination of field bean increased with higher proportions of early floral resources, whereas synchronous floral resources showed no measurable reduction in their pollination (CHAPTER 5). Habitat maps also explained field bean pollination better than floral resource maps. Here, pollination increased with increasing proportions of built-up areas in the landscapes and decreased with increasing proportions of arable land.
Our results highlight the importance of the spatio-temporal availability of certain key species as resource plants of wild bees in agricultural landscapes. They show that habitat maps are ahead of, or at least equal to, spatio-temporally resolved floral resource maps in predicting wild bee development and pollination. Nevertheless, floral resource maps allow us to draw more accurate conclusions between key floral resources and the organisms studied. The proximity to forest edges had a positive effect on each of the three wild bee species studied. However, besides pure food availability, other factors seem to co-determine the occurrence of wild bees in agricultural landscapes.
Mathematical models of species dispersal and the resilience of metapopulations against habitat loss
(2021)
Habitat loss and fragmentation due to climate and land-use change are among the biggest threats to biodiversity, as the survival of species relies on suitable habitat area and the possibility to disperse between different patches of habitat. To predict and mitigate the effects of habitat loss, a better understanding of species dispersal is needed. Graph theory provides powerful tools to model metapopulations in changing landscapes with the help of habitat networks, where nodes represent habitat patches and links indicate the possible dispersal pathways between patches.
This thesis adapts tools from graph theory and optimisation to study species dispersal on habitat networks as well as the structure of habitat networks and the effects of habitat loss. In chapter 1, I will give an introduction to the thesis and the different topics presented in this thesis. Chapter 2 will then give a brief summary of tools used in the thesis.
In chapter 3, I present our model on possible range shifts for a generic species. Based on a graph-based dispersal model for a generic aquatic invertebrate with a terrestrial life stage, we developed an optimisation model that models dispersal directed to predefined habitat patches and yields a minimum time until these patches are colonised with respect to the given landscape structure and species dispersal capabilities. We created a time-expanded network based on the original habitat network and solved a mixed integer program to obtain the minimum colonisation time. The results provide maximum possible range shifts, and can be used to estimate how fast newly formed habitat patches can be colonised. Although being specific for this simulation model, the general idea of deriving a surrogate can in principle be adapted to other simulation models.
Next, in chapter 4, I present our model to evaluate the robustness of metapopulations. Based on a variety of habitat networks and different generic species characterised by their dispersal traits and habitat demands, we modeled the permanent loss of habitat patches and subsequent metapopulation dynamics. The results show that species with short dispersal ranges and high local-extinction risks are particularly vulnerable to the loss of habitat across all types of networks. On this basis, we then investigated how well different graph-theoretic metrics of habitat networks can serve as indicators of metapopulation robustness against habitat loss. We identified the clustering coefficient of a network as the only good proxy for metapopulation robustness across all types of species, networks, and habitat loss scenarios.
Finally, in chapter 5, I utilise the results obtained in chapter 4 to identify the areas in a network that should be improved in terms of restoration to maximise the metapopulation robustness under limited resources. More specifically, we exploit our findings that a network’s clustering coefficient is a good indicator for metapopulation robustness and develop two heuristics, a Greedy algorithm and a deducted Lazy Greedy algorithm, that aim at maximising the clustering coefficient of a network. Both algorithms can be applied to any network and are not specific to habitat networks only.
In chapter 6, I will summarize the main findings of this thesis, discuss their limitations and give an outlook of future research topics.
Overall this thesis develops frameworks to study the behaviour of habitat networks and introduces mathematical tools to ecology and thus narrows the gap between mathematics and ecology. While all models in this thesis were developed with a focus on aquatic invertebrates, they can easily be adapted to other metapopulations.
Rivers play an important role in the global water cycle, support biodiversity and ecological integrity. However, river flow and thermal regimes are heavily altered in dammed rivers. These impacts are being exacerbated and become more apparent in rivers fragmented by multiple dams. Recent studies mainly focused on evaluating the cumulative impact of cascade reservoirs on flow or thermal regimes, but the role of upstream reservoirs in shaping the hydrology and hydrodynamics of downstream reservoirs remains poorly understood. To improve the understanding of the hydrodynamics in cascade reservoirs, long-term observational data are used in combination with numerical modeling to investigate the changes in flow and thermal regime in three cascade reservoirs at the upper reach of the Yangtze River. The three studied reservoirs are Xiluodu (XLD), Xiangjiaba (XJB) and Three Gorges Reservoir (TGR). In addition, the effects of single reservoir operation (at seasonal/daily time scale) on hydrodynamics are examined in a large tributary of TGR. The results show that the inflow of TGR has been substantially altered by the two upstream reservoirs with a higher discharge in spring and winter and a reduced peak flow in summer. XJB had no obvious contribution to the variations in inflow of TGR. The seasonal water temperature of TGR was also widely affected by the upstream two reservoirs, i.e., an increase in winter and decrease in spring, associated with a delay in water temperature rise and fall. These effects will probably be intensified in the coming years due to the construction of new reservoirs. The study also underlines the importance of reservoir operation in shaping the hydrodynamics of TGR. The seasonal dynamics of density currents in a tributary bay of TGR are closely related to seasonal reservoir operations. In addition, high-frequency water level fluctuations and flow velocity variations were observed in response to periodic tributary bay oscillations, which are driven by the diurnal discharge variations caused by the operation of TGR. As another consequence of operation of cascade reservoirs, the changes in TGR inflow weakened spring thermal stratification and caused warming in spring, autumn and winter. In response to this change, the intrusions from TGR occurred more frequently as overflow and earlier in spring, which caused a sharp reduction in biomass and frequency of phytoplankton blooms in tributary bays of TGR. This study suggests that high-frequency bay oscillations can potentially be used as an efficient management strategy for controlling algal blooms, which can be included in future multi-objective ecological conservation strategies.
Despite the significant presence of neuroactive substances in the environment, bioassays that allow to detect diverse groups of neuroactive mechanisms of action are not well developed and not properly integrated into environmental monitoring and chemical regulation. Therefore, there is a need to develop testing methods which are amenable for fast and high-throughput neurotoxicity testing. The overall goal of this thesis work is to develop a test method for the toxicological characterization and screening of neuroactive substances and their mixtures which could be used for prospective and diagnostic hazard assessment.
In this thesis, the behavior of zebrafish embryos was explored as a promising tool to distinguish between different neuroactive mechanisms of action. Recently, new behavioral tests have been developed including photomotor response (PMR), locomotor response (LMR) and spontaneous tail coiling (STC) tests. However, the experimental parameters of these tests lack consistency in protocols such as exposure time, imaging time, age of exposure, endpoint parameter etc. To understand how experimental parameters may influence the toxicological interpretation of behavior tests, a systematic review of existing behavioral assays was conducted in Chapter 2. Results show that exposure concentration and exposure duration highly influenced the comparability between different test methods and the spontaneous tail coiling (STC) test was selected for further testing based on its relative higher sensitivity and capacity to detect neuroactive substances (Chapter 2).
STC is the first observable motor activity generated by the developing neural network of the embryo which is assumed to occur as a result of the innervation of the muscle by the primary motor neurons. Therefore, STC could be a useful endpoint to detect effect on the muscle innervation and also the on the whole nervous system. Consequently, important parameters of the STC test were optimized and an automated workflow to evaluate the STC with the open access software KNIME® was developed (Chapter 3).
To appropriately interpret the observed effect of a single chemical and especially mixture effects, requires the understanding of toxicokinetics and biotransformation. Most importantly, the biotransformation capacity of zebrafish embryos might be limited and this could be a challenge for assessment of chemicals such as organophosphates which require a bioactivation step to effectively inhibit the acetylcholinesterase (AChE) enzyme. Therefore, the influence of the potential limited biotransformation on the toxicity pathway of a typical organophosphate, chlorpyrifos, was investigated in Chapter 5. Chlorpyrifos could not inhibit AChE and this was attributed to possible lack of biotransformation in 24 hpf embryos (Chapter 5).
Since neuroactive substances occur in the environment as mixtures, it is therefore more realistic to assess their combined effect rather than individually. Therefore, mixture toxicity was predicted using the concentration addition and independent action models. Result shows that mixtures of neuroactive substances with different mechanisms of action but similar effects can be predicted with concentration addition and independent action (Chapter 4). Apart
from being able to predict the combined effect of neuroactive substances for prospective risk assessment, it is also important to assess in retrospect the combined neurotoxic effect of environmental samples since neuroactive substances are the largest group of chemicals occurring in the environment. In Chapter 6, the STC test was found to be capable of detecting neurotoxic effects of a wastewater effluent sample. Hence, the STC test is proposed as an effect based tool for monitoring environmental acute and neurotoxic effects.
Overall, this thesis shows the utility and versatility of zebrafish embryo behavior testing for screening neuroactive substances and this allows to propose its use for prospective and diagnostic hazard assessment. This will enhance the move away from expensive and demanding animal testing. The information contained in this thesis is of great potential to provide precautionary solutions, not only for the exposure of humans to neuroactive chemicals but for the environment at large.