Tagging systems are intriguing dynamic systems, in which users collaboratively index resources with the so-called tags. In order to leverage the full potential of tagging systems, it is important to understand the relationship between the micro-level behavior of the individual users and the macro-level properties of the whole tagging system. In this thesis, we present the Epistemic Dynamic Model, which tries to bridge this gap between the micro-level behavior and the macro-level properties by developing a theory of tagging systems. The model is based on the assumption that the combined influence of the shared background knowledge of the users and the imitation of tag recommendations are sufficient for explaining the emergence of the tag frequency distribution and the vocabulary growth in tagging systems. Both macro-level properties of tagging systems are closely related to the emergence of the shared community vocabulary. rnrnWith the help of the Epistemic Dynamic Model, we show that the general shape of the tag frequency distribution and of the vocabulary growth have their origin in the shared background knowledge of the users. Tag recommendations can then be used for selectively influencing this general shape. In this thesis, we especially concentrate on studying the influence of recommending a set of popular tags. Recommending popular tags adds a feedback mechanism between the vocabularies of individual users that increases the inter-indexer consistency of the tag assignments. How does this influence the indexing quality in a tagging system? For this purpose, we investigate a methodology for measuring the inter-resource consistency of tag assignments. The inter-resource consistency is an indicator of the indexing quality, which positively correlates with the precision and recall of query results. It measures the degree to which the tag vectors of indexed resources reflect how the users perceive the similarity between resources. We argue with our model, and show it with a user experiment, that recommending popular tags decreases the inter-resource consistency in a tagging system. Furthermore, we show that recommending the user his/her previously used tags helps to increase the inter-resource consistency. Our measure of the inter-resource consistency complements existing measures for the evaluation and comparison of tag recommendation algorithms, moving the focus to evaluating their influence on the indexing quality.