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- Crayfish plague (2)
- Freshwater crayfish (2)
- Anabaena sp. (1)
- Antagonistic interactions (1)
- Aphanomyces astaci (1)
- Astacus astacus (1)
- Barbatula barbatula (1)
- Bodenchemie (1)
- Calothrix desertica (1)
- Carnivora (1)
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- Fachbereich 4 (1)
- Institut für Integrierte Naturwissenschaften (1)
- Institut für Integrierte Naturwissenschaften, Abt. Biologie (1)
- Institut für Integrierte Naturwissenschaften, Abt. Physik (1)
- Institut für Umweltwissenschaften (1)
- Mathematisches Institut (1)
Agricultural plastic covers made from polyethylene (PE) and polypropylene (PP) provide increased yields and an improved crop quality. However, such covers are suspected of partially breaking down into smaller debris and thereby contributing to soil pollution with microplastics. To scrutinize this, we randomly sampled 240 topsoil cores (0–5 cm) from eight fields which were covered with fleeces, perforated foils, and plastic mulches for less than 2 years. Samples from the field periphery (50 m perimeter) served as a reference. Visual plastic debris > 2 mm was analyzed by Fourier transform infrared spectroscopy. Smaller, soil-associated plastic debris was dispersed from 50 g of fine soil (≤ 2 mm) using sodium hexametaphosphate solution and density-separated with saturated NaCl solution. The collected PE, PP, and polystyrene (PS) debris was selectively dissolved in a mixture of 1,2,4-trichlorobenzene and p-xylene at 150 °C and quantified by pyrolysis–gas chromatography–mass spectrometry (Py-GC/MS). We counted six PE and PS fragments > 2 mm in two out of eight fields. By contrast, Py-GC/MS detected PE, PP, and PS contents in the fine soil of six fields (6 % of all samples). In three fields, PE levels of 3–35 mg kg−1 were potentially associated with the use of thinner and less durable perforated foils (40 µm thickness). This was slightly more pronounced at field edges where the plastic covers are turned and weighed down. By contrast, 50 µm thick PE films were not shown to emit any plastic debris. PP contents of 5–10 mg kg−1 were restricted to single observations in the field centers of three sites. At one site, we found expanded PS particles > 2 mm that concurred with elevated PS levels (8–19 mg kg−1) in the fine soil. Both PP and PS were distributed indistinctly across sites so that their source remained unresolved. In addition, the extent to which plastic contents of up to 7 mg kg−1 in the field periphery of some sites were attributed to wind drift from the covered fields or from external sources needs to be investigated in future studies. Our results suggest that the short-term use of thicker and more durable plastic covers should be preferred over thinner or perforated films to limit plastic emissions and accumulation in soil.
Objectives: Crayfish plague disease, caused by the oomycete pathogen Aphanomyces astaci represents one of the greatest risks for the biodiversity of the freshwater crayfish. This data article covers the de novo transcriptome assembly and annotation data of the noble crayfish and the marbled crayfish challenged with Ap. astaci. Following the controlled infection experiment (Francesconi et al. in Front Ecol Evol, 2021, https://doi.org/10.3389/fevo.2021.647037), we conducted a differential gene expression analysis described in (Boštjančić et al. in BMC Genom, 2022, https://doi.org/10.1186/s12864-022-08571-z) Data description: In total, 25 noble crayfish and 30 marbled crayfish were selected. Hepatopancreas tissue was isolated, followed by RNA sequencing using the Illumina NovaSeq 6000 platform. Raw data was checked for quality with FastQC, adapter and quality trimming were conducted using Trimmomatic followed by de novo assembly with Trinity. Assembly quality was assessed with BUSCO, at 93.30% and 93.98% completeness for the noble crayfish and the marbled crayfish, respectively. Transcripts were annotated using the Dammit! pipeline and assigned to KEGG pathways. Respective transcriptome and raw datasets may be reused as the reference transcriptome assemblies for future expression studies.
The production of isolated metallic nanoparticles with multifunctionalized properties, such as size and shape, is crucial for biomedical, photocatalytic, and energy storage or remediation applications. This study investigates the initial particle formations of gold nanoparticles (AuNPs) bioproduced in the cyanobacteria Anabaena sp. using high-resolution transmission electron microscopy images for digital image analysis. The developed method enabled the discovery of cerium nanoparticles (CeNPs), which were biosynthesized in the cyanobacteria Calothrix desertica. The particle size distributions for AuNPs and CeNPs were analyzed. After 10 h, the average equivalent circular diameter for AuNPs was 4.8 nm, while for CeNPs, it was approximately 5.2 nm after 25 h. The initial shape of AuNPs was sub-round to round, while the shape of CeNPs was more roundish due to their amorphous structure and formation restricted to heterocysts. The local PSDs indicate that the maturation of AuNPs begins in the middle of vegetative cells and near the cell membrane, compared to the other regions of the cell.
Coat color and pattern are a distinguished feature in mammalian carnivores, shaped by climatic cycles and habitat type. It can be expressed in various ways, such as gradients, polymorphisms, and rare color variants. Although natural selection explains much of the phenotypic variation found in the wild, genetic drift and heterozygote deficiency, as prominent in small and fragmented populations, may also affect phenotypic variability through the fixation of recessive alleles. The aim of this study was to test whether rare color variants in the wild could relate to a deficiency of heterozygotes, resulting from habitat fragmentation and small population size. We present an overview of all rare color variants in the order Carnivora, and compiled demographic and genetic data of the populations where they did and did not occur, to test for significant correlations. We also tested how phylogeny and body weight influenced the presence of color variants with phylogenetic generalized linear mixed models (PGLMMs). We found 40 color-variable species and 59 rare color variants. In 17 variable phenotypic populations for which genetic diversity was available, the average AR was 4.18, HO = 0.59, and HE= 0.66, and FIS= 0.086. We found that variable populations displayed a significant reduction in heterozygosity and allelic richness compared to non-variable populations across species. We also found a significant negative correlation between population size and inbreeding coefficients. Therefore, it is possible that small effective size had phenotypic consequences on the extant populations. The high frequency of the rare color variants (averaging 20%) also implies that genetic drift is locally overruling natural selection in small effective populations. As such, rare color variants could be added to the list of phenotypic consequences of inbreeding in the wild.
Background: For over a century, scientists have studied host-pathogen interactions between the crayfish plague disease agent Aphanomyces astaci and freshwater crayfish. It has been hypothesised that North American crayfish hosts are disease-resistant due to the long-lasting coevolution with the pathogen. Similarly, the increasing number of latent infections reported in the historically sensitive European crayfish hosts seems to indicate that similar coevolutionary processes are occurring between European crayfish and A. astaci. Our current understanding of these host-pathogen interactions is largely focused on the innate immunity processes in the crayfish haemolymph and cuticle, but the molecular basis of the observed disease-resistance and susceptibility remain unclear. To understand how coevolution is shaping the host’s molecular response to the pathogen, susceptible native European noble crayfish and invasive disease-resistant marbled crayfish were challenged with two A. astaci strains of different origin: a haplogroup A strain (introduced to Europe at least 50 years ago, low virulence) and a haplogroup B strain (signal crayfish in lake Tahoe, USA, high virulence). Here, we compare the gene expression profiles of the hepatopancreas, an integrated organ of crayfish immunity and metabolism.
Results: We characterised several novel innate immune-related gene groups in both crayfish spe cies. Across allchallenge groups, we detected 412 differentially expressed genes (DEGs) in the noble crayfish, and 257 DEGs in the marbled crayfish. In the noble crayfish, a clear immune response was detected to the haplogroup B strain, but not to the haplogroup A strain. In contrast, in the marbled crayfish we detected an immune response to the haplogroup A strain, but not to the haplogroup B strain. Conclusions: We highlight the hepatopancreas as an important hub for the synthesis of immune molecules in the response to A. astaci. A clear distinction between the innate immune response in the marbled crayfish and the noble crayfish is the capability of the marbled crayfish to mobilise a higher variety of innate immune response effectors.
Ponds in agricultural landscapes are often used by amphibians as breeding habitat. However, the characteristics of agricultural ponds and especially the surrounding area are usually said to be suboptimal for many amphibian species. Using suboptimal habitats might allow a species’ survival and reproduction, but can have negative consequences at the individual and population level. In the present study, we investigated Palmate Newt (Lissotriton helveticus) populations from an intensive wine-growing region in southern Germany and compared them with populations located in a nearby forested area in terms of biometric traits, age and genetic structure. By analyzing over 900 adult newts from 11 ponds, we could show that newts reproducing in forest ponds were larger than newts reproducing in agricultural ponds. We did not find differences in the newt age and growth rate between habitat types. Therefore, differences in the body size of newts might already existed in larvae and/or juveniles, what might be related to a lower habitat quality for larvae and/or juveniles in the agricultural landscape. Body mass, body condition and sexual dimorphic traits (length of the caudal filament and max. height of the tail) correlated with body size, but no additional effect of the habitat type was found. The analysis of microsatellites revealed a higher genetic diversity in forest ponds. However, no clear sign of inbreeding was observed in any agricultural population, suggesting some degree of gene flow between them. We conclude, that agricultural ponds can be suitable habitats for the Palmate Newt and that conservation effort should aim to preserve them. The observed effects on body size indicate the need to increase the quality of the aquatic and terrestrial habitat for early life stages of this newt species in agricultural landscapes.
This work addresses the challenge of calibrating multiple solid-state LIDAR systems. The study focuses on three different solid-state LIDAR sensors that implement different hardware designs, leading to distinct scanning patterns for each system. Consequently, detecting corresponding points between the point clouds generated by these LIDAR systems—as required for calibration—is a complex task. To overcome this challenge, this paper proposes a method that involves several steps. First, the measurement data are preprocessed to enhance its quality. Next, features are extracted from the acquired point clouds using the Fast Point Feature Histogram method, which categorizes important characteristics of the data. Finally, the extrinsic parameters are computed using the Fast Global Registration technique. The best set of parameters for the pipeline and the calibration success are evaluated using the normalized root mean square error. In a static real-world indoor scenario, a minimum root mean square error of 7 cm was achieved. Importantly, the paper demonstrates that the presented approach is suitable for online use, indicating its potential for real-time applications. By effectively calibrating the solid-state LIDAR systems and establishing point correspondences, this research contributes to the advancement of multi-LIDAR fusion and facilitates accurate perception and mapping in various fields such as autonomous driving, robotics, and environmental monitoring.
Background. Agricultural plastic mulches offer great benefits such as higher yields and lower pesticide use. Yet, plastic mulches may disintegrate over time and fragment into smaller debris. Such plastic debris is expected to remain in the field after removal of the plastic mulch and thus contributes to soil contamination with plastics.
Method. To investigate this, we collected soil samples at 0–10 cm and 10–40 cm depth from three fields covered with black mulch film for three consecutive years. Three fields without any reported plastic use served as control. Visual plastic debris > 1 cm (macroplastics) was collected from the soil surface. Mesoplastics between 2 mm and 1 cm were density separated from the sampled soil using saturated NaCl solution and analyzed by Fourier-transform infrared spectroscopy. Debris ≤ 2 mm (microplastics) was dispersed from 50 g soil using sodium hexametaphosphate solution followed by the aforementioned density separation. The separated polyethylene (PE), polypropylene (PP), and polystyrene (PS) were quantified via solvent-based pyrolysis–gas chromatography/mass spectrometry (Py–GC/MS).
Results. With 89–206 fragments ha−1, the majority of macroplastics were located in fields previously covered with mulch films. 80% of the collected specimen were identified as black PE film. The number of mesoplastics in plastic-mulched soil was 2.3 particles kg−1, while only 1.0 particles kg−1 were found in the reference fields. Py–GC/MS revealed microplastic levels of up to 13 mg kg−1. The PE content was significantly higher in plastic-mulched fields than in reference fields.
Discussion. Although the identified plastic levels are lower than those reported in comparable studies, our results still suggest that plastic mulching functions as a source of plastic debris in agricultural systems. Due to its severely restricted degradability, these plastics are likely to accumulate in soil in the long term and further fragment into smaller and smaller debris.
Potential impacts of invasive crayfish on native
benthic fish: shelter use and agonistic behaviour
(2023)
Spinycheek crayfish (Faxonius limosus) and signal crayfish (Pacifastacus leniusculus) are successful North American invasive crayfish species distributed throughout Europe. Both species compete with native benthic fish for shelter. In a laboratory approach, we assessed competition for shelter and antagonistic interactions between these invasive crayfish species and the native benthic fish species, stone loach (Barbatula barbatula) and bullhead (Cottus gobio). This allows for studying the potential impacts of invasive crayfish on native benthic fish. Spinycheek crayfish and signal crayfish were able to gain control of the shelter and could successfully displace both benthic fish species. For stone loach, the presence of crayfish significantly decreased their shelter use and caused several behavioural changes such as reduced activity and increased hiding behaviour outside the shelter. Although the shelter use by bullheads was not reduced, they displayed similar behavioural changes, if less intense. Invasive crayfish species showed remarkable combative interactions against both species of benthic fishes, evidenced by the high number of aggressive interactions, especially concerning stone loach. Our results highlight the pronounced dominance of invasive crayfish over benthic fish in terms of shelter competition and aggressive interactions under laboratory conditions, which consequently might promote the latter’s exposure to predation.
Counts of SARS-CoV-2-related deaths have been key numbers for justifying severe political, social and economical measures imposed by authorities world-wide. A particular focus thereby was the concomitant excess mortality (EM), i.e. fatalities above the expected all-cause mortality (AM). Recent studies, inter alia by the WHO, estimated the SARS-CoV-2-related EM in Germany between 2020 and 2021 as high as 200 000. In this study, we attempt to scrutinize these numbers by putting them into the context of German AM since the year 2000. We propose two straightforward, age-cohort-dependent models to estimate German AM for the ‘Corona pandemic’ years, as well as the corresponding flu seasons, out of historic data. For Germany, we find overall negative EM of about −18 500 persons for the year 2020, and a minor positive EM of about 7000 for 2021, unveiling that officially reported EM counts are an exaggeration. In 2022, the EM count is about 41 200. Further, based on NAA-test-positive related death counts, we are able to estimate how many Germans have died due to rather than with CoViD-19; an analysis not provided by the appropriate authority, the RKI. Through 2020 and 2021 combined, our due estimate is at no more than 59 500. Varying NAA test strategies heavily obscured SARS-CoV-2-related EM, particularly within the second year of the proclaimed pandemic. We compensated changes in test strategies by assuming that age-cohort-specific NAA-conditional mortality rates during the first pandemic year reflected SARS-CoV-2-characteristic constants.
Although most plastic pollution originates on land, current research largely remains focused on aquatic ecosystems. Studies pioneering terrestrial microplastic research have adapted analytical methods from aquatic research without acknowledging the complex nature of soil. Meanwhile, novel methods have been developed and further refined. However, methodical inconsistencies still challenge a comprehensive understanding of microplastic occurrence and fate in and on soil. This review aims to disentangle the variety of state-of-the-art sample preparation techniques for heterogeneous solid matrices to identify and discuss best-practice methods for soil-focused microplastic analyses. We show that soil sampling, homogenization, and aggregate dispersion are often neglected or incompletely documented. Microplastic preconcentration is typically performed by separating inorganic soil constituents with high-density salt solutions. Not yet standardized but currently most used separation setups involve overflowing beakers to retrieve supernatant plastics, although closed-design separation funnels probably reduce the risk of contamination. Fenton reagent may be particularly useful to digest soil organic matter if suspected to interfere with subsequent microplastic quantification. A promising new approach is extraction of target polymers with organic solvents. However, insufficiently characterized soils still impede an informed decision on optimal sample preparation. Further research and method development thus requires thorough validation and quality control with well-characterized matrices to enable robust routine analyses for terrestrial microplastics.
Increasingly, problematic smartphone use behavior (PSU) and excessive consumption are reported. In this study, an experiment was developed to investigate the influence of screen coloration using the grayscale setting on smartphone usage time in repeated measurements. We also investigated how individuals perceived suffering correlates with smartphone usage time and PSU, and whether differences exist by smartphone usage type (social, process, habitual). 240 subjects completed a questionnaire about smartphone usage time, PSU, perceived suffering, and smartphone usage types. Afterward, their smartphones were switched to grayscale setting for at least 24h, and thereafter 92 of these participants completed the second questionnaire. Analyses showed that grayscale setting decreases usage time and that there is a positive correlation between PSU, smartphone usage duration, and perceived suffering. The types of use (process and habitual) influence one’s perceived suffering. Thus, it shows that individuals are aware of their PSU and suffer from it. Using grayscale setting is effective in reducing smartphone use time.
X-ray computer tomography (XRT) is a three-dimensional, nondestructive, and thus reproducible examination method that allows for the investigation of internal and external structures of objects. Due to its characteristics, the XRT technique has increasingly established itself as an alternative examination method and is also applied in the field of mineral processing. Within this work, XRT is used to investigate the influence of hydrochloric acid leaching of iron-rich bauxites on grain composition. Acid leaching is a promising method for the beneficiation of iron-rich bauxites for refractories. Many studies have already established that leaching with hydrochloric acid can reduce the Fe₂O₃ content in bauxites. However, apart from the influence of the leaching process on the composition of the bauxites, aspects such as the influence of the acid on the exact grain constitution or the porosity behavior have rarely been considered so far. To address these open questions, XRT analysis was used to examine and characterize various bauxites. By comparing identical grains before and after leaching, it was observed that in gibbsite bauxites the acid penetration is deeper, and the volume decreases significantly. In diasporic and boehmitic bauxites, clear leaching edges can be seen in which the iron content has been reduced.
The Coronavirus Pandemic has influenced the lives of many people. We analyzed the effects of physical activity and stress on students’ motivation during the Pandemic. Participants were 254 university students who reported their academic motivation, physical activity, general stress, the Coronavirus Pandemic strain, and their Coronavirus stress. Women reported higher levels of Coronavirus stress, general stress, and motivation. The Coronavirus stress was predicted by the strain of the Coronavirus Pandemic but not by physical activity. General stress and gender predicted mastery goals, and performance goals were predicted by general stress. Physical activity was not related to students’ motivation during the Pandemic. Higher levels of general stress were associated with higher academic motivation. Negative emotions like stress could have enhanced students’ motivation during uncertain times of the Pandemic. Moreover, a moderate stress level could be favorable for academic dedication and achievement.
Men are currently underrepresented in traditionally female care-oriented (communal) engagement such as taking parental leave, whereas they are overrepresented in traditionally male (agentic) engagement such as breadwinning or leadership. We examined to what extent different prototypical representations of men affect men’s self-reported parental leave-taking intentions and more generally the future they can imagine for themselves with regard to work and care roles (i.e., their possible selves). We expected prototypes of men that combine the two basic stereotype dimensions of agency and communion to increase men’s communal intentions. In two experiments (N1 = 132, N2 = 233), we presented male participants with contrived newspaper articles that described the ideal man of today with varying degrees of agency and communion (between-subjects design with four conditions; combined agentic and communal vs. agentic vs. communal vs. control condition). Results of Experiment 1 were in line with the main hypothesis that especially presenting a combination of agency and communion increases men’s expectations for communal engagement: As compared to a control condition, men expected more to engage in caretaking in the future, reported higher parental leave-taking intentions, and tended to expect taking longer parental leave. Experiment 2 only partially replicated these findings, namely for parental leave-taking intentions. Both experiments additionally provided initial evidence for a contrast effect in that an exclusive focus on agency also increased men’s self-reported parental leave-taking intentions compared to the control condition. Yet, exclusively emphasizing communion in prototypes of men did not affect men’s communal intentions, which were high to begin with. We further did not find evidence for preregistered mechanisms. We discuss conditions and explanations for the emergence of these mixed effects as well as implications for the communication of gendered norms and barriers to men’s communal engagement more broadly.
X-ray computed tomography (XRT) is a three-dimensional (3D), non-destructive, and reproducible investigation method capable of visualizing and examining internal and external structures of components independent of the material and geometry. In this work, XRT with its unique abilities complements conventionally utilized examination methods for the investigation of microstructure weakening induced by hydrogen corrosion and furthermore provides a new approach to corrosion research. The motivation for this is the current inevitable transformation to hydrogen-based steel production. Refractories of the system Al2O3-SiO2 are significant as lining materials. Two exemplary material types A and B, which differ mainly in their Al2O3:SiO2 ratio, are examined here using XRT. Identical samples of the two materials are measured, analyzed, and then compared before and after hydrogen attack. In this context, hydrogen corrosion-induced porosity and its spatial distribution and morphology are investigated. The results show that sample B has an higher resistance to hydrogen-induced attack than sample A. Furthermore, the 3D-representation revealed a differential porosity increase within the microstructure.