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Institute
- Institut für Computervisualistik (46) (remove)
Tractography on HARDI data
(2011)
Diffusion weighted imaging is an important modality in clinical imaging and the only possibility to gain insight into the human brain noninvasively and in-vivo. The applications of this imaging technique are diversified. It is used to study the brain, its structure, development and the functionality of the different areas. Further, important fields of application are neurosurgical planning, examinations of pathologies, investigation of Alzheimer-, strokes, and multiple sclerosis. This thesis gives a brief introduction to MRI and diffusion MRI. Based on this, the mostly used data representation in diffusion MRI in clinical imaging, the diffusion tensor, is introduced. As the diffusion tensor suffers from severe limitations new techniques subsumed under the term HARDI (high angular resolution diffusion imaging) are introduced and discussed in detail. Further, an extensive introduction to tractography, approaches that aim at reconstructing neuronal fibers, is given. Based on the knowledge fromthe theoretical part established tractography algorithms are redesigned to handle HARDI data and, thus, improve the reconstruction of neuronal fibers. Among these algorithms, a novel approach is presented that successfully reconstructs fibers on phantom data as well as on human brain data. Further, a novel global classification approach is presented to cluster voxels according to their diffusion properties.
Zusätzlich zum Rendern wird die Rechenleistung moderner Grafikkarten immer häufiger auch für allgemeine Berechnungen (GPGPU) genutzt. Für die Umsetzung stehen verschiedene Möglichkeiten zur Verfügung, die von der Verwendung der Renderingpipeline bis zu eigenständigen Schnittstellen reichen. In dieser Arbeit werden mit Render-To-Texture, Transform Feedback, Compute Shader und OpenCL vier verschiedene GPGPU-Methoden untersucht. Anhand von Partikelsystemen werden sie hinsichtlich der benötigten Berechnungszeit, der GPU-Auslastung, Lines of Code und Portierbarkeit miteinander verglichen. Dazu wurden sowohl das N-Körper Problem, Smoothed Particle Hydrodynamics und ein Partikelschwarm als Partikelsysteme umgesetzt. Es konnte gezeigt werden, dass insbesondere OpenCL und Compute Shader sehr gute Ergebnisse liefern.
This thesis presents a prototypical application for speech therapy as a therapeutical tool, simulating the articulation of German phonemes and the swallowing reflex. A special attention is given to a three-dimensional visualization of anatomical models of the pharyngolaryngeal region, which can be used in an interactive way. For examining the benefits of such an application in relation to conventional therapy mediums, the thesis considers iteratively the requirements of speech therapists.
Die Medizinische Visualisierung komplexer Gefäßbäume hat das Potential den klinischen Alltag in der Gefäßchirurgie zu erleichtern.
Dazu sind exakte, hochaufgelöste Darstellungen und echtzeitfähige Berechnungsmethoden notwendig. Bekannte Ansätze aus den Bereichen der direkten (z.B. Raycasting) und indirekten
(z.B. Marching Cubes) Volumenvisualisierung sind nicht in der Lage alle Anforderungen zufriedenstellend zu erfüllen. Verbesserte
Ergebnisse können mit hybriden Methoden erzielt werden, die unterschiedliche Visualisierungsverfahren kombinieren.
Im Rahmen dieser Arbeit wurde ein hybrides Renderingsystem zur Darstellung von Blutgefäßen entwickelt, das die Bildqualität durch Integration einer Marching Cubes Oberfläche in ein Raycasting–System optimiert, dabei Detailstrukturen erhält und ausreichende Performanz zur Interaktion bietet. Die Ergebnissezeigen die verbesserte Plastizität und Genauigkeit der Darstellung.Anhand von Experten– und Laienbefragungen konnte der Nutzen des Systems vor allem für die Patientenaufklärung nachgewiesen werden. Die Erschließung zusätzlicher Anwendungsgebiete ist durch die Weiterentwicklung des Renderers möglich.
Simulation of fractures
(2014)
Real-time computing often avoids the simulation of fractures due to its complexity. The field of engineering science provides methods to create these simulations to improve games and other applications. Steadily rising computer capacities allow suitable simulations on a real-time basis and make this aspect increasingly interesting. The topic and aim of this research is to simulate fractures of stiff bodies. The primary objective is the physical plausibility and performance of the application. This thesis analyses the potential of computer science to realize the simulation of fractures.
Three existing as well as one self-created were implemented and analysed. The works "Real time simulation of deformation and Fracture of stiff material" from Müller et al., "real time simulation of Brittle Fracture using Modal analysis" from Glondu et al. and "Fast and Controllable simulation of the Shattering of Brittle Objects" from Smith et al. form the basis of this thesis. The introduced methods use different computation of forces and fractures. The developed procedure uses the idea of generating secondary breaks. The approaches were implemented based on the Bullet physics-engine. The results of the work show that physically based breaks are realizable on a real-time basis.
The analysis of the physical methods demonstrates that their performance mainly depends on the constitution of the used objects. This thesis shows that the further investigation of this topic can discover new possibilities. The improvement of the realism in virtual worlds can be achieved by executing physically plausible methods.
Object recognition is a well-investigated area in image-based computer vision and several methods have been developed. Approaches based on Implicit Shape Models have recently become popular for recognizing objects in 2D images, which separate objects into fundamental visual object parts and spatial relationships between the individual parts. This knowledge is then used to identify unknown object instances. However, since the emergence of aσordable depth cameras like Microsoft Kinect, recognizing unknown objects in 3D point clouds has become an increasingly important task. In the context of indoor robot vision, an algorithm is developed that extends existing methods based on Implicit Shape Model approaches to the task of 3D object recognition.
In this thesis, we deal with the question if challenge, flow and fun in computer games are related to each other, and which influence the motivational, psychological components motivation of success, motivation of failure and the chance of success do have. In addition, we want to know if a free choice in the level of difficulty is the optimal way to flow. To examine these theories, a study based on an online survey was executed, in which the participants played the game “flOw“. The results were evaluated with the help of a two-factorial analysis of variance with repeated measurement and tests on correlation. Thereby we found out that there actually exists a relation between challenge, flow and fun and that motivation does matter indirectly.
In current research of the autonomous mobile robots, path planning is still a very important issue.
This master's thesis deals with various path planning algorithms for the navigation of such mobile systems. This is not only to determine a collision-free trajectory from one point to another. The path should still be optimal and comply with all vehicle-given constraints. Especially the autonomous driving in an unknown and dynamic environment poses a major challenge, because a closed-loop control is necessary and thus a certain dynamic of the planner is demanded.
In this paper, two types of algorithms are presented. First, the path planner, based on A*, which is a common graph search algorithm: A*, Anytime Repairing A*, Lifelong Planning A*, D* Lite, Field D*, hybrid A*. Second, the algorithms which are based on the probabilistic planning algorithm Rapidly-exploring Random Tree (Rapidly-exploring Random Tree, RRT*, Lifelong Planning RRT*), as well as some extensions and heuristics. In addition, methods for collision avoidance and path smoothing are presented. Finally, these different algorithms are evaluated and compared with each other.
The mitral valve is one of the four valves in the human heart. It is located in the left heart chamber and its function is to control the blood flow from the left atrium to the left ventricle. Pathologies can lead to malfunctions of the valve so that blood can flow back to the atrium. Patients with a faulty mitral valve function may suffer from fatigue and chest pain. The functionality can be surgically restored, which is often a long and exhaustive intervention. Thorough planning is necessary to ensure a safe and effective surgery. This can be supported by creating pre-operative segmentations of the mitral valve. A post-operative analysis can determine the success of an intervention. This work will combine existing and new ideas to propose a new approach to (semi-)automatically create such valve models. The manual part can guarantee a high quality model and reliability, whereas the automatic part contributes to saving valuable labour time.
The main contributions of the automatic algorithm are an estimated semantic separation of the two leaflets of the mitral valve and an optimization process that is capable of finding a coaptation-line and -area between the leaflets. The segmentation method can perform a fully automatic segmentation of the mitral leaflets if the annulus ring is already given. The intermediate steps of this process will be integrated into a manual segmentation method so a user can guide the whole procedure. The quality of the valve models generated by the method proposed in this work will be measured by comparing them to completely manually segmented models. This will show that commonly used methods to measure the quality of a segmentation are too general and do not suffice to reflect the real quality of a model. Consequently the work at hand will introduce a set of measurements that can qualify a mitral valve segmentation in more detail and with respect to anatomical landmarks. Besides the intra-operative support for a surgeon, a segmented mitral valve provides additional benefits. The ability to patient-specifically obtain and objectively describe the valve anatomy may be the base for future medical research in this field and automation allows to process large data sets with reduced expert dependency. Further, simulation methods that use the segmented models as input may predict the outcome of a surgery.
This master- thesis investigates the topic of intercultural web design. Two websites from different countries are exemplarily compared. On the basis of cultural dimensions, cultural differences are presented on each respective website. The analysis particularly focuses on how detailed the respective website-designer and -operator regards their users" cultural differences and the creation of a cross-cultural web design. The analysis illustrates which cultural - and particularly intercultural - aspects of countries were taken into consideration in the design of the web sites. The investigation led to the conclusion that their implementation was not consequently executed for all web sites. Hence, this thesis offers suggestions for the improvement of aspects which are most important in intercultural web design.
Today, augmented reality is becoming more and more important in several areas like industrial sectors, medicine, or tourism. This gain of importance can easily be explained by its powerful extension of real world content. Therefore, augmented realty became a way to explain and enhance the real world information. Yet, to create a system which can enhance a scene with additional information, the relation between the system and the real world must be known. In order to establish this relationship a commonly used method is optical tracking. The system calculates its relation to the real world from camera images. To do so, a reference which is known is needed in the scene to serve as an orientation. Today, this is mostly a 2D-marker or a 2D-texture. These are placed in the real world scenery to serve as a reference. But, this is an intrusion in the scene. That is why it is desirable that the system works without such an additional aid. An strategy without manipulating the scene is object-tracking. In this approach, any object from the scene can be used as a reference for the system. As an object is far more complex than a marker, it is harder for the system to establish its relationship with the real world. That is why most methods for 3D-object-tracking reduce the object by not using the whole object as reference. The focus of this thesis is to research how a whole object can be used as a reference in a way that either the system or the camera can be moved in any 360 degree angle around the object without loosing the relation to the real world. As a basis the augmented reality framework, the so called VisionLib, is used. Extensions to this system for 360 degree tracking are implemented in different ways and analyzed in the scope of this work. Also, the different extensions are compared. The best results were achieved by improving the reinitialization process. With this extension, current camera images of the scene are given to the system. With the hek of these images, the system can calculate the relation to the real world faster in case the relation went missing.
Einfluss eines Ausrichtungswerkzeugs auf die Bedienbarkeit in unbeaufsichtigten Eyetrackingsystemen
(2015)
Eye gaze trackers are devices that can estimate the direction of gaze of a person. Among usability testing eye tracking also allows persons with decreased limb mobility to control or to interact with the computer. The quality and availability of eye tracking equipment has been increasing while costs have been decreasing. This development leads to entering new markets by using eye tracking as an additional input dimension for a variety of applications. Up to now eye tracking has been supervised by qualified experts, who assured that the important conditions like position in front of the eye tracking device, calibration and light conditions has been kept, while using.
This thesis examines an adjustment tool, which is helping the user to adjust in front of the eye tracker and helping to keep this position during the experiment. Furthermore the accuracy while moving the head has been analysed. In this experiment an remote eye gaze tracker has been used to control a game character in the video game called 'Schau Genau!'. The goal was to determine whether the game is playable without the barrier of adjusting and calibration. The results show that adjusting in front of an eye tracker is not a problem, keeping this position is. Small changes of the head position after the calibration process leads to a lack of accuracy. Giving up the calibration and using someone else calibration shows way bigger deviation. Additional head movement increases error rate and makes controlling more difficult.
Statistical Shape Models (SSMs) are one of the most successful tools in 3Dimage analysis and especially medical image segmentation. By modeling the variability of a population of training shapes, the statistical information inherent in such data are used for automatic interpretation of new images. However, building a high-quality SSM requires manually generated ground truth data from clinical experts. Unfortunately, the acquisition of such data is a time-consuming, error-prone and subjective process. Due to this effort, the majority of SSMs is often based on a limited set of this ground truth training data, which makes the models less statistically meaningful. On the other hand, image data itself is abundant in clinics from daily routine. In this work, methods for automatically constructing a reliable SSM without the need of manual image interpretation from experts are proposed. Thus, the training data is assumed to be the result of any segmentation algorithm or may originate from other sources, e.g. non-expert manual delineations. Depending on the algorithm, the output segmentations will contain errors to a higher or lower degree. In order to account for these errors, areas of low probability of being a boundary should be excluded from the training of the SSM. Therefore, the probabilities are estimated with the help of image-based approaches. By including many shape variations, the corrupted parts can be statistically reconstructed. Two approaches for reconstruction are proposed - an Imputation method and Weighted Robust Principal Component Analysis (WRPCA). This allows the inclusion of many data sets from clinical routine, covering a lot more variations of shape examples. To assess the quality of the models, which are robust against erroneous training shapes, an evaluation compares the generalization and specificity ability to a model build from ground truth data. The results show, that especially WRPCA is a powerful tool to handle corrupted parts and yields to reasonable models, which have a higher quality than the initial segmentations.
The goal of this thesis is to create and develop a concept for a mobile city guide combined with game-based contents.
The application is intented to support flexible and independent exploration of the city of Koblenz.
Based on the geographical data, historical information for and interesting stories of various places were provided in this application. These informations are combined with playful elements in order to create a motivating concept.
Therefore, related approaches were examined and, combined with own ideas, a new concept has been developed. This concept has been prototypically implemented as an Android application and afterwards evaluated by 15 test persons. A questionnaire was used to examine the operability, the motivation of game patterns and the additional value of the application.
One of the fundamental decisions during the development of any system is the representation of data. In computer graphics, objects are usually represented as sets of triangles. There are however many different variants with their own strengths and weaknesses. This thesis will explore distancefields as a representation for objects. Distancefields are functions, which map every point in space to the distance to the closest surface point. While this description is very simple, a number of interesting properties can be derived, allowing for a multitude of shapes, operations and effects. An overview of the necessary background and methods is given. Furthermore, some extended or new approaches are presented, such as displaying implicit surfaces, approximating indirect illumination or implementing a GPU tracer.
While Virtual Reality has been around for decades it gained new life in recent years. The release of the first consumer hardware devices allows fully immersive and affordable VR for the user at home. This availability lead to a new focus of research on technical problems as well as psychological effects. The concepts of presence, describing the feeling of being in the virtual place, body ownership and their impact are central topics in research for a long time and still not fully understood.
To enable further research in the area of Mixed Reality, we want to introduce a framework that integrates the users body and surroundings inside a visual coherent virtual environment. As one of two main aspects we want to merge real and virtual objects to a shared environment in a way such that they are no longer visually distinguishable. To achieve this the main focus is not supposed to be on a high graphical fidelity but on a simplified representation of reality. The essential question is, what level of visual realism is necessary to create a believable mixed reality environment that induces a sense of presence in the user? The second aspect considers the integration of virtual persons. Can characters be recorded and replayed in a way such that they are perceived as believable entities of the world and therefore act as a part of the users environment?
The purpose of this thesis was the development of a framework called Mixed Reality Embodiment Platform. This inital system implements fundamental functionalities to be used as a basis for future extensions to the framework. We also provide a first application that enables user studies to evaluate the framework and contribute to aforementioned research questions.
In recent years head mounted displays (HMD) and their abilities to create virtual realities comparable with the real world moved more into the focus of press coverage and consumers. The reason for this lies in constant improvements in available computing power, miniaturisation of components as well as the constantly shrinking power consumption. These trends originate in the general technical progress driven by advancements made in smartphone sector. This gives more people than ever access to the required components to create these virtual realities. However at the same time there is only limited research which uses the current generation of HMDs especially when comparing the virtual and real world against each other. The approach of this thesis is to look into the process of navigating both real and virtual spaces while using modern hardware and software. One of the key areas are the spatial and peripheral perception without which it would be difficult to navigate a given space. The influence of prior real and virtual experiences on these will be another key aspect. The final area of focus is the influence on the emotional state and how it compares to the real world. To research these influences a experiment using the Oculus Rift DK2 HMD will be held in which subjects will be guided through a real space as well as a virtual model of it. Data will be gather in a quantitative manner by using surveys. Finally, the findings will be discussed based on a statistical evaluation. During these tests the different perception of distances and room size will the compared and how they change based on the current reality. Furthermore, the influence of prior spatial activities both in the real and the virtual world will looked into. Lastly, it will be checked how real these virtual worlds are and if they are sufficiently sophisticated to trigger the same emotional responses as the real world.
This work covers techniques for interactive and physically - based rendering of hair for computer generated imagery (CGI). To this end techniques
for the simulation and approximation of the interaction of light with hair are derived and presented. Furthermore it is described how hair, despite such computationally expensive algorithms, can be rendered interactively.
Techniques for computing the shadowing in hair as well as approaches to render hair as transparent geometry are also presented. A main focus of
this work is the DBK-Buffer, which was conceived, implemented and evaluated. Using the DBK-Buffer, it is possible to render thousands of hairs as
transparent geometry without being dependent on either the newest GPU hardware generation or a great amount of video memory. Moreover, a comprehensive evaluation of all the techniques described was conducted with respect to the visual quality, performance and memory requirements. This
revealed that hair can be rendered physically - based at interactive or even at real - time frame rates.
In scientific data visualization huge amounts of data are generated, which implies the task of analyzing these in an efficient way. This includes the reliable detection of important parts and a low expenditure of time and effort. This is especially important for the big-sized seismic volume datasets, that are required for the exploration of oil and gas deposits. Since the generated data is complex and a manual analysis is very time-intensive, a semi-automatic approach could on one hand reduce the time required for the analysis and on the other hand offer more flexibility, than a fully automatic approach.
This master's thesis introduces an algorithm, which is capable of locating regions of interest in seismic volume data automatically by detecting anomalies in local histograms. Furthermore the results are visualized and a variety of tools for the exploration and interpretation of the detected regions are developed. The approach is evaluated by experiments with synthetic data and in interviews with domain experts on the basis of real-world data. Conclusively further improvements to integrate the algorithm into the seismic interpretation workflow are suggested.
With the emergence of current generation head-mounted displays (HMDs), virtual reality (VR) is regaining much interest in the field of medical imaging and diagnosis. Room-scale exploration of CT or MRI data in virtual reality feels like an intuitive application. However in VR retaining a high frame rate is more critical than for conventional user interaction seated in front of a screen. There is strong scientific evidence suggesting that low frame rates and high latency have a strong influence on the appearance of cybersickness. This thesis explores two practical approaches to overcome the high computational cost of volume rendering for virtual reality. One lies within the exploitation of coherency properties of the especially costly stereoscopic rendering setup. The main contribution is the development and evaluation of a novel acceleration technique for stereoscopic GPU ray casting. Additionally, an asynchronous rendering approach is pursued to minimize the amount of latency in the system. A selection of image warping techniques has been implemented and evaluated methodically, assessing the applicability for VR volume rendering.